Publications

Zhou, Kevin C., and Roarke Horstmeyer. “Diffraction tomography with a deep image prior.” Optics Express 28, no. 9 (April 2020): 12872–96. https://doi.org/10.1364/oe.379200.

Konda, Pavan Chandra, Lars Loetgering, Kevin C. Zhou, Shiqi Xu, Andrew R. Harvey, and Roarke Horstmeyer. “Fourier ptychography: current applications and future promises.” Optics Express 28, no. 7 (March 2020): 9603–30. https://doi.org/10.1364/oe.386168.

Del Hougne, Philipp, Mohammadreza F. Imani, Aaron V. Diebold, Roarke Horstmeyer, and David R. Smith. “Learned Integrated Sensing Pipeline: Reconfigurable Metasurface Transceivers as Trainable Physical Layer in an Artificial Neural Network.” Advanced Science (Weinheim, Baden-Wurttemberg, Germany) 7, no. 3 (February 2020): 1901913. https://doi.org/10.1002/advs.201901913.

Loetgering, Lars, Margarita Baluktsian, Kahraman Keskinbora, Roarke Horstmeyer, Thomas Wilhein, Gisela Schütz, Kjeld S. E. Eikema, and Stefan Witte. “Generation and characterization of focused helical x-ray beams.” Science Advances 6, no. 7 (February 2020): eaax8836. https://doi.org/10.1126/sciadv.aax8836.

Dai, X., P. C. Konda, S. Xu, and R. W. Horstmeyer. “Towards a vectorial treatment of Fourier ptychographic microscopy.” In Optics Infobase Conference Papers, 2020.

Chaware, Amey, Colin L. V. Cooke, Kanghyun Kim, and Roarke Horstmeyer. “Towards an Intelligent Microscope: Adaptively Learned Illumination for Optimal Sample Classification.” In ICASSP, 9284–88. IEEE, 2020.

Liu, W., R. Qian, S. Xu, P. C. Konda, and R. Horstmeyer. “Fast sensitive diffuse correlation spectroscopy with a SPAD array.” In Optics Infobase Conference Papers, Vol. Part F179-OTS-2020, 2020. https://doi.org/10.1364/OTS.2020.SM3D.3.

Liu, W., S. Xu, R. Qian, P. C. Konda, and R. Horstmeyer. “Classifying decorrelation events hidden beneath scattering media via SPAD array detection.” In Optics InfoBase Conference Papers, 2020.

Muthumbi, Alex, Amey Chaware, Kanghyun Kim, Kevin C. Zhou, Pavan Chandra Konda, Richard Chen, Benjamin Judkewitz, Andreas Erdmann, Barbara Kappes, and Roarke Horstmeyer. “Learned sensing: jointly optimized microscope hardware for accurate image classification.” Biomedical Optics Express 10, no. 12 (December 2019): 6351–69. https://doi.org/10.1364/boe.10.006351.

Harfouche, M., T. W. Dunn, E. A. Naumann, and R. Horstmeyer. “Imaging the behavior and neural activity of freely moving organisms with a gigapixel microscope.” In Optics Infobase Conference Papers, Vol. Part F169-BRAIN 2019, 2019. https://doi.org/10.1364/BRAIN.2019.BT3A.3.

Zhong, L., P. C. Konda, M. Harfouche, and R. Horstmeyer. “Depth tracking using a multi-aperture microscope.” In Optics Infobase Conference Papers, Vol. Part F170-COSI 2019, 2019. https://doi.org/10.1364/COSI.2019.CM1A.CTh4A.2.

Horstmeyer, R., I. M. Vellekoop, and B. Judkewitz. “Transmission matrix correlations.” In Wavefront Shaping for Biomedical Imaging, 315–28, 2019. https://doi.org/10.1017/9781316403938.014.

Kadobianskyi, M., I. N. Papadopoulos, T. Chaigne, R. Horstmeyer, and B. Judkewitz. “Scattering correlations of time-gated light.” Optica 5, no. 4 (April 20, 2018): 389–94. https://doi.org/10.1364/OPTICA.5.000389.

Horstmeyer, Roarke, Richard Y. Chen, Barbara Kappes, and Benjamin Judkewitz. “Convolutional neural networks that teach microscopes how to image,” September 21, 2017.

Osnabrugge, G., R. Horstmeyer, I. N. Papadopoulos, B. Judkewitz, and I. M. Vellekoop. “Generalized optical memory effect.” Optica 4, no. 8 (August 20, 2017): 886–92. https://doi.org/10.1364/OPTICA.4.000886.

Ryu, Donghun, Zihao Wang, Kuan He, Guoan Zheng, Roarke Horstmeyer, and Oliver Cossairt. “Subsampled phase retrieval for temporal resolution enhancement in lensless on-chip holographic video.” Biomedical Optics Express 8, no. 3 (March 2017): 1981–95. https://doi.org/10.1364/boe.8.001981.

Wang, Z., D. Ryu, K. He, R. Horstmeyer, A. Katsaggelos, and O. Cossairt. “High-speed holographic imaging using compressed sensing and phase retrieval.” In Proceedings of SPIE the International Society for Optical Engineering, Vol. 10222, 2017. https://doi.org/10.1117/12.2262737.

Wang, Z., Q. Dai, D. Ryu, K. He, R. Horstmeyer, A. K. Katsaggelos, and O. Cossairt. “Dictionary-based phase retrieval for space-time super resolution using lens-free on-chip holographic video.” In Optics Infobase Conference Papers, Vol. Part F46-COSI 2017, 2017. https://doi.org/10.1364/COSI.2017.CTu2B.3.

Ryu, Donghun, Zihao Wang, Kuan He, Roarke Horstmeyer, and Oliver Cossairt. “Subsampled Phase Retrieval for On-chip Lensless Holographic Video,” December 7, 2016.

Holloway, J., M. S. Asif, M. K. Sharma, N. Matsuda, R. Horstmeyer, O. Cossairt, and A. Veeraraghavan. “Toward Long-Distance Subdiffraction Imaging Using Coherent Camera Arrays.” IEEE Transactions on Computational Imaging 2, no. 3 (September 1, 2016): 251–65. https://doi.org/10.1109/TCI.2016.2557067.

Ou, Xiaoze, Jaebum Chung, Roarke Horstmeyer, and Changhuei Yang. “Aperture scanning Fourier ptychographic microscopy.” Biomedical Optics Express 7, no. 8 (August 2016): 3140–50. https://doi.org/10.1364/boe.7.003140.

Horstmeyer, Roarke, Jaebum Chung, Xiaoze Ou, Guoan Zheng, and Changhuei Yang. “Diffraction tomography with Fourier ptychography.” Optica 3, no. 8 (August 2016): 827–35. https://doi.org/10.1364/optica.3.000827.

Chung, Jaebum, Jinho Kim, Xiaoze Ou, Roarke Horstmeyer, and Changhuei Yang. “Simultaneous fluorescence and high-resolution bright-field imaging with aberration correction over a wide field-of-view with Fourier ptychographic microscopy (FPM) (Conference Presentation).” In Three-Dimensional and Multidimensional Microscopy: Image Acquisition and Processing XXIII, edited by Thomas G. Brown, Carol J. Cogswell, and Tony Wilson, 18–18. SPIE, 2016. https://doi.org/10.1117/12.2211974.

Chung, Jaebum, Jinho Kim, Xiaoze Ou, Roarke Horstmeyer, and Changhuei Yang. “Wide field-of-view fluorescence image deconvolution with aberration-estimation from Fourier ptychography.” Biomedical Optics Express 7, no. 2 (February 2016): 352–68. https://doi.org/10.1364/boe.7.000352.

Horstmeyer, R., R. Heintzmann, G. Popescu, L. Waller, and C. Yang. “Standardizing the resolution claims for coherent microscopy.” Nature Photonics 10, no. 2 (February 1, 2016): 68–71. https://doi.org/10.1038/nphoton.2015.279.